Ribalet Lab - SeaFlow@UW
Ribalet Lab - SeaFlow@UW
Research
People
SeaFlow
Software
Data
Publications
Contact
2
Scalable clustering algorithms for continuous environmental flow cytometry
Motivation: Recent technological innovations in flow cytometry now allow oceanographers to collect high-frequency flow cytometry data …
Jeremy Hyrkas
,
Sophie Clayton
,
Francois Ribalet
,
Daniel Halperin
,
E. Virginia Armbrust
,
Bill Howe
PDF
Cite
DOI
Light-driven synchrony of Prochlorococcus growth and mortality in the subtropical Pacific gyre
Theoretical studies predict that competition for limited resources reduces biodiversity to the point of ecological instability, whereas …
Francois Ribalet
,
Jarred Swalwell
,
Sophie Clayton
,
Valeria Jiménez
,
Sebastian Sudek
,
Yajuan Lin
,
Zackary I. Johnson
,
Alexandra Z. Worden
,
E. Virginia Armbrust
PDF
Cite
DOI
Phytoplankton cell lysis associated with polyunsaturated aldehyde release in the northern Adriatic Sea
Diatoms are able to react to biotic and abiotic stress, such as competition, predation and unfavorable growth conditions, by producing …
Francois Ribalet
,
Mauro Bastianini
,
Charles Vidoudez
,
Francesco Acri
,
John Berges
,
Adrianna Ianora
,
Antonio Miralto
,
Georg Pohnert
,
Giovanna Romano
,
Thomas Wichard
,
Raffaella Casotti
PDF
Cite
DOI
Collaborative science workflows in SQL
SQLShare is a Web-based application that emphasizes a simple upload-query-share protocol over conventional database design and uses ad …
Bill Howe
,
Daniel Halperin
,
Francois Ribalet
,
S. Chitnis
,
E.Virginia Armbrust
PDF
Cite
DOI
The influence of net community production and phytoplankton community structure on CO2 uptake in the Gulf of Alaska
Biological productivity is a key factor controlling the ocean’s ability to take up carbon dioxide from the atmosphere. However, …
Hilary I. Palevsky
,
Francois Ribalet
,
Jarred E. Swalwell
,
Catherine E. Cosca
,
Edward D. Cokelet
,
Richard A. Feely
,
E. Virginia Armbrust
,
Paul D. Quay
PDF
Cite
DOI
flowPhyto: Enabling automated analysis of microscopic algae from continuous flow cytometric data
Motivation: Flow cytometry is a widely used technique among biologists to study the abundances of populations of microscopic algae …
Francois Ribalet
,
David Schruth
,
E. Virginia Armbrust
PDF
Cite
DOI
Seaflow: A novel underway flow-cytometer for continuous observations of phytoplankton in the ocean
Current automated flow cytometers primarily target the dynamics of phytoplankton communities in coastal environments and lack the …
Jarred E. Swalwell
,
Francois Ribalet
,
E. Virginia Armbrust
PDF
Cite
DOI
Unveiling a phytoplankton hotspot at a narrow boundary between coastal and offshore waters
In terrestrial ecosystems, transitional areas between different plant communities (ecotones) are formed by steep environmental …
Francois Ribalet
,
Adrian Marchetti
,
Kate A. Hubbard
,
Katherin Brown
,
Colleen .A. Durkin
,
Rhonda Morales
,
Marie Robert
,
Jarred E. Swalwell
,
Philippe D. Tortell
,
E. Virginia Armbrust
PDF
Cite
DOI
Ferritin is used for iron storage in bloom-forming marine pennate diatoms
Primary productivity in 30-40% of the world’s oceans is limited by availability of the micronutrient iron. Regions with …
Adrian Marchetti
,
Micaela S. Parker
,
Lauren Moccia
,
Ellen O. Lin
,
Angele L. Arrieta
,
Francois Ribalet
,
Michael Murphy
,
Maria Maldonado
,
E. Virginia Armbrust
PDF
Cite
DOI
High plasticity in the production of diatom-derived polyunsaturated aldehydes under nutrient limitation: physiological and ecological implications
Diatoms have evolved a silicified cell wall that provides an efficient barrier against herbivores. These microalgae also produce …
Francois Ribalet
,
Charles Vidoudez
,
Daniele Cassin
,
Georg Pohnert
,
Adrianna Ianora
,
Antonio Miralto
,
Raffaella Casotti
Cite
DOI
«
»
Cite
×