Collaborative science workflows in SQL

Bill Howe, Daniel Halperin, Francois Ribalet, S. Chitnis, E.Virginia Armbrust
January 2013
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Abstract

SQLShare is a Web-based application that emphasizes a simple upload-query-share protocol over conventional database design and uses ad hoc interactive query over general-purpose programming. Here, a case study examines the use of SQLShare as an alternative to script-based scientific workflows for a project in observational biological oceanography. © 1999-2011 IEEE.

Type
2
Publication
Computing in Science and Engineering
Database Applications Scientific Computing Scientific Databases Workflow Management
Francois Ribalet
Francois Ribalet
Research Associate Professor

Our research combines SeaFlow cytometry and statistical modeling to study how environmental changes shape marine phytoplankton communities and their central role in ocean ecosystems and the global carbon cycle.